Project 5SNP Discovery and GenotypingCandidate Gene ListAGTR2 Main Page > SNPs Genotyped in AGTR2


SNPs Genotyped for LD Determination in AGTR2

Reference cDNA sequence (GenBank):   NM_000686

Download raw genotyping data for AGTR2

SNP ID alias dbSNP UCSC Coordinates Results Minor Allele Frequency in Caucasians Polymorphism Type Alternate Nucleotides Mendel Errors Hwpval % geno Primer Information Flanking Sequence
rs12389014   rs12389014 chrX:114076511 MONO   5' of transcribed region C/T   1 96.8 view view
rs7058966   rs7058966 chrX:114076601 MONO   5' of transcribed region C/G   1 97.8 view view
rs7062659   rs7062659 chrX:114076878 MONO   5' of transcribed region A/C   1 97.8 view view
rs11091044   rs11091044 chrX:114077480 MONO   5' of transcribed region A/G   1 100 view view
rs11091045   rs11091045 chrX:114077519 MONO   5' of transcribed region C/G   1 97.8 view view
rs12401251   rs12401251 chrX:114078337 MONO   5' of transcribed region A/G   1 91.4 view view
rs12016382   rs12016382 chrX:114078970 MONO   5' of transcribed region G/T   1 97.8 view view
rs7887425   rs7887425 chrX:114079430 MONO   5' of transcribed region C/G   1 96.8 view view
rs12400126   rs12400126 chrX:114080445 MONO   5' of transcribed region A/C   1 98.9 view view
rs5950583   rs5950583 chrX:114081182 MONO   5' of transcribed region A/G   1 100 view view
rs4540571   rs4540571 chrX:114082687 MONO   5' of transcribed region A/T   1 100 view view
rs4326546   rs4326546 chrX:114082760 MONO   5' of transcribed region T/C   1 100 view view
rs4412522   rs4412522 chrX:114082823 MONO   5' of transcribed region T/C   1 100 view view
rs4969800   rs4969800 chrX:114083658 MONO   5' of transcribed region A/T   1 100 view view
rs5950585   rs5950585 chrX:114084089 MONO   5' of transcribed region C/T   1 93.5 view view
rs5950586   rs5950586 chrX:114084286 MONO   5' of transcribed region A/G   1 100 view view
rs5190   rs5190 chrX:114088133 MONO   Silent T/C   0.91 97.8 view view
rs5192   rs5192 chrX:114088415 MONO   Silent T/C   0.91 97.8 view view
rs1042860   rs1042860 chrX:114088439 GOOD 0.01 Missense C/G 1 1 100 view view
rs7063431   rs7063431 chrX:114093624 MONO   3' of transcribed region C/T   1 100 view view
rs7055638   rs7055638 chrX:114093676 MONO   3' of transcribed region G/T   1 100 view view
rs6520185   rs6520185 chrX:114094099 MONO   3' of transcribed region C/T   1 91.4 view view

Download a spreadsheet containing this information for all CardioGenomics SNPs that have undergone genotyping:


Page last modified September 14, 2005.

Project 5SNP Discovery and GenotypingCandidate Gene ListAGTR2 Main Page > SNPs Genotyped in AGTR2