Project 5 > SNP Discovery and Genotyping > Candidate Gene List > ADRA1D Main Page > SNPs Genotyped in ADRA1D

SNPs Genotyped for LD Determination in ADRA1D

Reference cDNA sequence (GenBank):   NM_000678

Download raw genotyping data for ADRA1D

SNP ID alias dbSNP UCSC Coordinates Results Minor Allele Frequency in Caucasians Polymorphism Type Alternate Nucleotides Mendel Errors Hwpval % geno Primer Information Flanking Sequence
rs1477759   rs1477759 chr20:GP alignment not found GOOD 0.01 GP alignment not found C/G   0.92 89.2 view view
rs1555316   rs1555316 chr20:4187823 GOOD 0.01 3' of transcribed region C/G   1 91.7 view view
hCV1212874   rs4239758 chr20:4187916 GOOD 0.46 3' of transcribed region G/T   0.19 97.8 view view
rs910952   rs910952 chr20:4188694 GOOD 0.03 3' of transcribed region C/T   0.99 94.8 view view
rs910951   rs910951 chr20:4191704 GOOD 0.05 3' of transcribed region C/T   1 89.2 view view
rs910950   rs910950 chr20:4191928 GOOD 0.13 3' of transcribed region A/G   0.81 93.5 view view
hCV1212870     chr20:4192142 GOOD 0.43 3' of transcribed region G/C   0.14 100 view view
rs910949   rs910949 chr20:4192198 GOOD 0.47 3' of transcribed region C/T   0.74 82.8 view view
rs4815668   rs4815668 chr20:4192895 GOOD 0.17 3' of transcribed region C/T   0.98 100 view view
rs6116267   rs6116267 chr20:4193630 MONO   3' of transcribed region C/T   1 100 view view
rs4813674   rs4813674 chr20:4194517 MONO   3' of transcribed region A/G   1 96.8 view view
rs744419   rs744419 chr20:4195230 MONO   3' of transcribed region A/C   0.92 86.5 view view
rs734290   rs734290 chr20:4195595 GOOD 0.27 3' of transcribed region A/G 1 0.92 82.8 view view
rs709023   rs709023 chr20:4196130 GOOD 0.28 3' of transcribed region A/T   1 90.3 view view
rs6107423   rs6107423 chr20:4196136 MONO   3' of transcribed region G/T   1 100 view view
rs7508786   rs7508786 chr20:4196913 MONO   3' UTR A/G   1 100 view view
rs709024   rs709024 chr20:4196984 GOOD 0.45 3' UTR A/G   0.98 75.3 view view
rs2236554   rs2236554 chr20:4197041 GOOD 0.38 3' UTR A/T   0.66 92.5 view view
rs835873   rs835873 chr20:4197802 GOOD 0.09 Intronic C/T   0.15 87.1 view view
rs8123898   rs8123898 chr20:4198114 GOOD 0.16 Intronic C/T   0.83 98.9 view view
rs835874   rs835874 chr20:4198219 GOOD 0.42 Intronic C/T   1 96.8 view view
rs835875   rs835875 chr20:4198226 GOOD 0.38 Intronic A/G   0.98 82.8 view view
rs12480114   rs12480114 chr20:4198890 GOOD 0.12 Intronic C/T   0.951 100 view view
rs6107424   rs6107424 chr20:4200050 MONO   Intronic A/G   1 100 view view
rs3787441   rs3787441 chr20:4200060 GOOD 0.19 Intronic A/G   0.77 89.2 view view
hCV11218743   rs6084663 chr20:4200072 GOOD 0.24 Intronic C/T   0.98 100 view view
rs709025   rs709025 chr20:4200351 GOOD 0.39 Intronic C/T   0.67 95.7 view view
rs6133097   rs6133097 chr20:4201036 MONO   Intronic A/G   1 97.8 view view
rs835877   rs835877 chr20:4201676 GOOD 0.23 Intronic C/T   0.16 96.8 view view
rs835878   rs835878 chr20:4201859 GOOD 0.42 Intronic C/T   0.56 87.1 view view
rs6107426   rs6107426 chr20:4202091 MONO   Intronic C/T   1 100 view view
rs835879   rs835879 chr20:4203227 GOOD 0.48 Intronic C/G   0.79 96.8 view view
rs835880   rs835880 chr20:4203895 GOOD 0.20 Intronic C/T   0.26 84.9 view view
hCV27369215     chr20:4205074 GOOD 0.26 Intronic C/T   0.2 100 view view
rs910953   rs910953 chr20:4205282 GOOD 0.01 Intronic C/T   1 94.8 view view
rs8183794   rs8183794 chr20:4205448 GOOD 0.20 Intronic A/G   0.096 98.9 view view
rs6052445   rs6052445 chr20:4205988 MONO   Intronic C/T   1 100 view view
rs6116268   rs6116268 chr20:4206440 GOOD 0.48 Intronic A/G   1 100 view view
rs6116269   rs6116269 chr20:4207272 MONO   Intronic C/T   1 100 view view
rs835883   rs835883 chr20:4207637 MONO   Intronic C/T   0.92 89.2 view view
rs6107427   rs6107427 chr20:4208043 MONO   Intronic C/T   1 98.9 view view
rs6076638   rs6076638 chr20:4208640 MONO   Intronic A/G   1 100 view view
rs6084666   rs6084666 chr20:4209235 GOOD 0.01 Intronic A/G   1 98.9 view view
rs946188   rs946188 chr20:4210316 GOOD 0.26 Intronic C/T   0.92 88.2 view view
rs1556832   rs1556832 chr20:4210557 GOOD 0.47 Intronic A/G   0.84 95.7 view view
rs4815669   rs4815669 chr20:4211482 GOOD 0.07 Intronic C/T 1 0.2 79.6 view view
hCV11218740   rs8118409 chr20:4211663 GOOD 0.26 Intronic C/T   0.82 98.9 view view
hCV11218736     chr20:4213165 GOOD 0.26 Intronic A/C   0.69 100 view view
rs6116271   rs6116271 chr20:4213422 MONO   Intronic A/G   1 86.8 view view
rs6139364   rs6139364 chr20:4215145 GOOD 0.27 Intronic C/G   1 92.3 view view
hCV11218734     chr20:4216550 GOOD 0.25 Intronic C/T   0.63 95.7 view view
hCV11218732     chr20:4216628 GOOD 0.26 Intronic C/T   0.69 98.9 view view
rs6076640   rs6076640 chr20:4216780 GOOD 0.19 Intronic C/T   1 100 view view
rs6139365   rs6139365 chr20:4218247 MONO   Intronic C/T   1 97.8 view view
rs4815674   rs4815674 chr20:4218407 GOOD 0.26 Intronic C/G   0.6 98.9 view view
hCV507066   rs4815676 chr20:4218467 GOOD 0.26 Intronic C/T   0.69 97.8 view view
rs2027269   rs2027269 chr20:4218982 GOOD 0.24 Intronic A/C   0.42 95.7 view view
rs6116273   rs6116273 chr20:4219145 MONO   Intronic C/T   1 100 view view
hCV507070   rs6052456 chr20:4220573 GOOD 0.20 Intronic A/G   0.52 97.8 view view
hCV507071     chr20:4220777 GOOD 0.06 Intronic C/G   0.99 100 view view
hCV507073   rs6052458 chr20:4220997 GOOD 0.48 Intronic C/T   0.61 96.8 view view
rs6116274   rs6116274 chr20:4221019 MONO   Intronic C/T   1 97.8 view view
hCV507076     chr20:4222963 GOOD 0.04 Intronic C/T   0.038 80.4 view view
hCV481000     chr20:4225276 GOOD 0.23 5' of transcribed region C/T 1 0.94 98.9 view view
rs3810568   rs3810568 chr20:4226258 GOOD 0.14 5' of transcribed region A/G 1 0.86 98.9 view view
hCV11218719     chr20:4226506 GOOD 0.23 5' of transcribed region A/G 1 0.94 97.8 view view
rs6116278   rs6116278 chr20:4227168 MONO   5' of transcribed region G/T   1 97.8 view view
rs6037795   rs6037795 chr20:4227699 GOOD 0.12 5' of transcribed region A/T   0.967 90.1 view view
hCV480997     chr20:4228326 GOOD 0.05 5' of transcribed region A/G   0.99 80.6 view view
rs6139366   rs6139366 chr20:4228784 GOOD 0.12 5' of transcribed region C/T   0.967 100 view view
rs4813676   rs4813676 chr20:4229639 GOOD 0.06 5' of transcribed region T/C   0.99 100 view view
rs6116281   rs6116281 chr20:4230305 MONO   5' of transcribed region C/T   1 89 view view
rs1538314   rs1538314 chr20:4230819 MONO   5' of transcribed region A/G   0.92 85.4 view view
rs6139367   rs6139367 chr20:4230923 MONO   5' of transcribed region A/G   1 100 view view
rs946190   rs946190 chr20:4231944 GOOD 0.21 5' of transcribed region A/G 1 0.85 90.3 view view
rs1538316   rs1538316 chr20:4232371 MONO   5' of transcribed region C/T   0.92 79.2 view view
rs4813677   rs4813677 chr20:4232479 GOOD 0.18 5' of transcribed region T/C   0.45 97.8 view view
hCV10039336   rs4813678 chr20:4232570 GOOD 0.20 5' of transcribed region G/C   0.48 81.7 view view
rs6107430   rs6107430 chr20:4232664 MONO   5' of transcribed region A/G   1 98.9 view view
hCV10039338     chr20:4233546 GOOD 0.19 5' of transcribed region A/G 1 0.44 97.8 view view
rs1886844   rs1886844 chr20:4234658 GOOD 0.20 5' of transcribed region A/C   0.7 90.3 view view
rs297671   rs297671 chr20:4422784 GOOD 0.36 5' of transcribed region A/T   0.6 97.8 view view

Download a spreadsheet containing this information for all CardioGenomics SNPs that have undergone genotyping:

Page last modified September 14, 2005.

Project 5 > SNP Discovery and Genotyping > Candidate Gene List > ADRA1D Main Page > SNPs Genotyped in ADRA1D