Project 5 > SNP Discovery and Genotyping > Candidate Gene List > ADRA1A Main Page > SNPs Genotyped in ADRA1A

SNPs Genotyped for LD Determination in ADRA1A

Reference cDNA sequence (GenBank):   NM_000680

Download raw genotyping data for ADRA1A

SNP ID alias dbSNP UCSC Coordinates Results Minor Allele Frequency in Caucasians Polymorphism Type Alternate Nucleotides Mendel Errors Hwpval % geno Primer Information Flanking Sequence
rs4732845   rs4732845 chr8:26618183 GOOD 0.27 3' of transcribed region A/C   0.72 98.9 view view
rs2218280   rs2218280 chr8:26619046 GOOD 0.10 3' of transcribed region A/T   0.87 92.5 view view
rs1442340   rs1442340 chr8:26619344 GOOD 0.10 3' of transcribed region A/G   0.91 88.2 view view
rs937352   rs937352 chr8:26620625 GOOD 0.43 3' of transcribed region C/G   0.7 92.5 view view
rs4732847   rs4732847 chr8:26621071 GOOD 0.43 3' of transcribed region G/T   0.54 97.8 view view
rs1472346   rs1472346 chr8:26623304 GOOD 0.23 3' of transcribed region A/G   0.95 76.3 view view
rs1470221   rs1470221 chr8:26623528 GOOD 0.10 3' of transcribed region A/T   0.92 93.5 view view
rs4732639   rs4732639 chr8:26627020 GOOD 0.27 3' of transcribed region T/C   0.85 96.8 view view
rs1157690   rs1157690 chr8:26632062 GOOD 0.16 3' of transcribed region A/G   0.99 88.2 view view
rs1442341   rs1442341 chr8:26632337 GOOD 0.10 3' of transcribed region A/G   0.94 87.1 view view
rs4732853   rs4732853 chr8:26632561 GOOD 0.08 3' of transcribed region C/T   1 92.5 view view
rs2291775   rs2291775 chr8:26633178 GOOD 0.05 3' of transcribed region C/T   0.99 100 view view
rs3739215   rs3739215 chr8:26635318 GOOD 0.31 3' of transcribed region C/G   0.64 86 view view
rs1496124   rs1496124 chr8:26638076 GOOD 0.32 3' of transcribed region A/G   0.7 83.9 view view
rs2036109   rs2036109 chr8:26638694 GOOD 0.27 3' of transcribed region A/C   0.25 96.8 view view
rs4732641   rs4732641 chr8:26639814 GOOD 0.26 3' of transcribed region G/T   0.49 98.9 view view
rs4236678   rs4236678 chr8:26640276 GOOD 0.32 3' of transcribed region G/T   0.32 100 view view
rs4732860   rs4732860 chr8:26642027 GOOD 0.05 3' of transcribed region A/C   0.98 86 view view
rs1353445   rs1353445 chr8:26643746 GOOD 0.06 3' of transcribed region A/G 1 0.15 90.3 view view
hCV2696449     chr8:26644937 GOOD 0.05 3' of transcribed region C/T   0.96 95.9 view view
rs3802241   rs3802241 chr8:26645294 GOOD 0.32 3' of transcribed region C/T   0.17 100 view view
hCV2696452     chr8:26646516 GOOD 0.32 3' of transcribed region C/T   0.29 97.8 view view
rs7841250   rs7841250 chr8:26648299 MONO   3' of transcribed region A/G   1 91.2 view view
G2286a5   rs2229126 chr8:26649582 GOOD 0.01 Missense A/T   1 100 view view
rs1048102   rs1048102 chr8:26649686 MONO   Missense C/G   0.91 90.6 view view
G2286a6 G2286a8 rs1048101 chr8:26649938 GOOD 0.36 Missense C/T   0.63 88.2 view view
hCV2696457     chr8:26650675 GOOD 0.36 Intronic A/G   0.39 95.7 view view
hCV2696458   rs7842829 chr8:26651246 GOOD 0.37 Intronic A/G   0.27 100 view view
rs2132448   rs2132448 chr8:26652309 MONO   Intronic A/G   0.92 80.4 view view
rs937351   rs937351 chr8:26652647 GOOD 0.36 Intronic A/G   0.33 95.7 view view
rs7460554   rs7460554 chr8:26653804 MONO   Intronic A/T   1 100 view view
hCV2696461   rs7818761 chr8:26653844 GOOD 0.35 Intronic G/T   0.19 84.9 view view
hCV2696462   rs6557946 chr8:26656499 GOOD 0.38 Intronic C/T   0.27 95.7 view view
rs6983689   rs6983689 chr8:26656648 MONO   Intronic G/T   1 97.8 view view
rs4732646   rs4732646 chr8:26658495 GOOD 0.17 Intronic G/A   0.41 100 view view
rs6989854   rs6989854 chr8:26658835 GOOD 0.44 Intronic A/G   0.433 100 view view
rs4082584   rs4082584 chr8:26662897 GOOD 0.07 Intronic C/T   0.99 89.2 view view
rs2055195   rs2055195 chr8:26662935 GOOD 0.39 Intronic A/G   0.18 100 view view
rs1874424   rs1874424 chr8:26662961 GOOD 0.34 Intronic C/T   0.27 98.9 view view
hCV2696468     chr8:26663924 GOOD 0.10 Intronic A/G   0.83 89.2 view view
hCV2696469     chr8:26664076 GOOD 0.05 Intronic A/G   1 86 view view
rs6998410   rs6998410 chr8:26664726 GOOD 0.22 Intronic A/G   0.541 100 view view
rs1908654   rs1908654 chr8:26665153 GOOD 0.23 Intronic C/T   0.69 82.8 view view
rs1908653   rs1908653 chr8:26665238 GOOD 0.23 Intronic G/T   0.65 98.9 view view
rs6998247   rs6998247 chr8:26665348 GOOD 0.11 Intronic C/T   1 95.6 view view
rs1908652   rs1908652 chr8:26665484 GOOD 0.06 Intronic A/G 1 0.99 79.6 view view
rs7832752   rs7832752 chr8:26665937 GOOD 0.27 Intronic C/G   0.6 98.9 view view
hCV2696481     chr8:26666277 GOOD 0.23 Intronic A/T   0.66 96.8 view view
rs7821620   rs7821620 chr8:26666582 GOOD 0.27 Intronic A/G   0.6 100 view view
rs1390511   rs1390511 chr8:26666810 GOOD 0.20 Intronic A/T   0.77 88.2 view view
rs1874427   rs1874427 chr8:26667180 GOOD 0.23 Intronic C/G   0.65 98.9 view view
rs1874425   rs1874425 chr8:26667396 GOOD 0.23 Intronic A/G   0.72 98.9 view view
rs4732874   rs4732874 chr8:26667522 GOOD 0.23 Intronic A/G   0.65 96.8 view view
rs4732875   rs4732875 chr8:26667679 GOOD 0.23 Intronic C/T   0.74 92.5 view view
rs6991399   rs6991399 chr8:26668786 GOOD 0.26 Intronic A/G   0.741 100 view view
rs7016091   rs7016091 chr8:26669356 GOOD 0.04 Intronic A/G   1 98.9 view view
rs6992572   rs6992572 chr8:26669487 GOOD 0.27 Intronic G/T   0.6 98.9 view view
rs4732652   rs4732652 chr8:26670656 GOOD 0.12 Intronic G/A   0.68 96.8 view view
rs6998591   rs6998591 chr8:26672732 GOOD 0.45 Intronic A/G   0.297 100 view view
rs4732881   rs4732881 chr8:26672953 GOOD 0.12 Intronic A/T   0.72 91.4 view view
hCV195263     chr8:26673920 GOOD 0.21 Intronic A/G   0.88 84.9 view view
rs4732654   rs4732654 chr8:26674374 GOOD 0.40 Intronic G/A   0.41 78.5 view view
rs7816634   rs7816634 chr8:26675187 MONO   Intronic C/T   1 100 view view
rs6995233   rs6995233 chr8:26676763 GOOD 0.26 Intronic C/T   0.25 100 view view
rs7827654   rs7827654 chr8:26677964 MONO   Intronic A/G   1 100 view view
rs4236680   rs4236680 chr8:26678936 GOOD 0.39 Intronic G/T   0.18 100 view view
rs7839120   rs7839120 chr8:26681421 GOOD 0.01 Intronic C/T   1 97.8 view view
rs1908648   rs1908648 chr8:26682139 MONO   Intronic G/A   1 97.8 view view
rs7835853   rs7835853 chr8:26684156 GOOD 0.17 Intronic A/G   0.429 100 view view
rs2036108   rs2036108 chr8:26685010 GOOD 0.18 Intronic A/G   0.33 96.8 view view
rs7816340   rs7816340 chr8:26687497 GOOD 0.14 Intronic A/G   0.397 98.9 view view
rs2055197   rs2055197 chr8:26691627 GOOD 0.37 Intronic A/T   0.59 98.9 view view
rs4732897   rs4732897 chr8:26692705 GOOD 0.30 Intronic A/G   0.94 98.9 view view
hCV26103903     chr8:26694637 GOOD 0.30 Intronic C/T 1 0.63 96.8 view view
rs7017961   rs7017961 chr8:26694839 GOOD 0.32 Intronic C/T 1 1 96.7 view view
hCV2696515     chr8:26695812 GOOD 0.33 Intronic C/T   0.94 94.6 view view
rs1496126   rs1496126 chr8:26696365 MONO   Intronic C/T   0.92 82.5 view view
hCV2696517     chr8:26696846 GOOD 0.20 Intronic C/T   0.52 97.8 view view
hCV2696519     chr8:26698337 GOOD 0.24 Intronic C/T   0.24 80.6 view view
rs6987037   rs6987037 chr8:26698427 MONO   Intronic A/G   1 97.8 view view
rs4732902   rs4732902 chr8:26701488 GOOD 0.26 Intronic C/T 1 1 93.4 view view
rs7002296   rs7002296 chr8:26701551 MONO   Intronic A/C   1 100 view view
rs11135958   rs11135958 chr8:26701976 MONO   Intronic G/T   1 93.5 view view
rs4416829   rs4416829 chr8:26704587 GOOD 0.31 Intronic A/G   0.06 94.6 view view
hCV2696523     chr8:26704728 MONO   Intronic A/G   0.91 88.2 view view
rs1390512   rs1390512 chr8:26705138 GOOD 0.25 Intronic C/T   0.2 98.9 view view
rs7820633   rs7820633 chr8:26705702 GOOD 0.40 Intronic C/T   1 98.9 view view
rs12547624   rs12547624 chr8:26705715 GOOD 0.18 Intronic G/T   1 98.9 view view
rs6990485   rs6990485 chr8:26706277 MONO   Intronic C/G   1 100 view view
rs7015564   rs7015564 chr8:26706368 GOOD 0.06 Intronic A/G   1 94.6 view view
rs7015591   rs7015591 chr8:26706415 MONO   Intronic A/G   1 100 view view
rs4732908   rs4732908 chr8:26706515 GOOD 0.09 Intronic A/T   0.543 100 view view
rs11780591   rs11780591 chr8:26706939 GOOD 0.05 Intronic A/G   1 100 view view
rs10110744   rs10110744 chr8:26707871 GOOD 0.08 Intronic C/T   1 98.9 view view
rs7017877   rs7017877 chr8:26709596 MONO   Intronic C/G   1 98.9 view view
hCV2696529     chr8:26710736 GOOD 0.42 Intronic C/T   1 100 view view
rs526302   rs526302 chr8:26712605 GOOD 0.12 Intronic T/G 1 0.88 82.8 view view
rs498989   rs498989 chr8:26713259 GOOD 0.44 Intronic A/G 1 0.62 83.9 view view
rs1383921   rs1383921 chr8:26713768 GOOD 0.12 Intronic C/T   0.64 91.4 view view
rs472151   rs472151 chr8:26714277 GOOD 0.44 Intronic C/T   0.98 96.8 view view
rs922737   rs922737 chr8:26714861 GOOD 0.10 Intronic G/A   1 96.7 view view
rs488323   rs488323 chr8:26715883 GOOD 0.37 Intronic A/C   0.35 89.2 view view
hCV2696533     chr8:26716302 GOOD 0.28 Intronic C/G   0.94 79.6 view view
rs564830   rs564830 chr8:26716700 GOOD 0.43 Intronic C/T   0.049 80.6 view view
rs2170406   rs2170406 chr8:26716704 GOOD 0.22 Intronic G/T   0.38 92.5 view view
hCV2959210   rs2322333 chr8:26717165 GOOD 0.50 Intronic C/T   0.8 90.3 view view
rs10085967   rs10085967 chr8:26717780 MONO   Intronic C/T   1 100 view view
rs574647   rs574647 chr8:26718967 GOOD 0.33 Intronic A/G   0.97 96.8 view view
rs577366   rs577366 chr8:26719275 GOOD 0.23 Intronic G/A   0.92 92.5 view view
rs4545110   rs4545110 chr8:26719957 GOOD 0.19 Intronic G/T   0.96 97.8 view view
rs495495   rs495495 chr8:26720078 GOOD 0.46 Intronic A/T   0.92 100 view view
rs472865   rs472865 chr8:26720381 GOOD 0.15 Intronic A/G   0.99 98.9 view view
rs556793   rs556793 chr8:26720977 GOOD 0.50 Intronic A/G   0.3 89.2 view view
rs3102087   rs3102087 chr8:26721847 GOOD 0.50 Intronic G/T   0.28 98.9 view view
rs2036107   rs2036107 chr8:26723354 GOOD 0.46 Intronic C/T   0.51 89.2 view view
rs523816   rs523816 chr8:26725660 GOOD 0.46 Intronic A/C   0.78 95.7 view view
rs523851   rs523851 chr8:26725678 GOOD 0.50 Intronic G/A 1 0.55 81.7 view view
rs557754   rs557754 chr8:26727472 GOOD 0.22 Intronic T/C   0.94 97.8 view view
rs558455   rs558455 chr8:26727491 GOOD 0.50 Intronic T/C   1 97.8 view view
rs538898   rs538898 chr8:26728728 GOOD 0.30 Intronic T/C   0.98 97.8 view view
rs539144   rs539144 chr8:26728815 GOOD 0.40 Intronic C/T   0.8 83.9 view view
hCV2696555     chr8:26730896 GOOD 0.08 Intronic A/G   0.98 98.9 view view
rs520180   rs520180 chr8:26731832 GOOD 0.37 Intronic T/C   1 97.8 view view
rs486354   rs486354 chr8:26732200 GOOD 0.31 Intronic C/T   0.8 97.8 view view
rs522315   rs522315 chr8:26732885 GOOD 0.36 Intronic G/T 1 0.82 82.5 view view
rs2046186   rs2046186 chr8:26733124 GOOD 0.17 Intronic C/T   1 95.7 view view
rs492209   rs492209 chr8:26733854 MONO   Intronic C/G   0.92 80.2 view view
rs544104   rs544104 chr8:26733900 GOOD 0.31 Intronic C/T   0.99 95.7 view view
rs544215   rs544215 chr8:26733938 GOOD 0.50 Intronic T/C   0.82 98.9 view view
rs497883   rs497883 chr8:26734805 GOOD 0.38 Intronic G/A   0.98 95.7 view view
rs580739   rs580739 chr8:26735617 GOOD 0.33 Intronic C/G   0.35 98.9 view view
rs11997367   rs11997367 chr8:26735967 MONO   Intronic C/T   1 100 view view
hCV2696563     chr8:26736784 GOOD 0.21 Intronic C/T   0.32 80.6 view view
rs522996   rs522996 chr8:26737141 GOOD 0.22 Intronic A/G   0.73 100 view view
rs507943   rs507943 chr8:26737551 GOOD 0.01 Intronic A/G   0.92 86.5 view view
rs489790   rs489790 chr8:26738532 GOOD 0.21 Intronic C/T   0.97 79.6 view view
rs538378   rs538378 chr8:26738625 GOOD 0.21 Intronic C/T   0.79 89.2 view view
rs562110   rs562110 chr8:26738918 GOOD 0.01 Intronic C/T   0.92 82.5 view view
hCV2696565   rs563097 chr8:26739033 GOOD 0.21 Intronic C/T   0.86 88.2 view view
rs878331   rs878331 chr8:26739627 GOOD 0.01 Intronic A/T   0.92 85.6 view view
hCV2696566     chr8:26739727 GOOD 0.19 Intronic A/G   0.94 98.9 view view
hCV2696567     chr8:26740273 GOOD 0.25 Intronic C/T   1 95.7 view view
rs471188   rs471188 chr8:26742302 GOOD 0.03 Intronic A/T   0.99 91.2 view view
rs580644   rs580644 chr8:26742400 GOOD 0.05 Intronic T/C 1 0.7 100 view view
rs4732682   rs4732682 chr8:26742803 GOOD 0.50 Intronic G/A   0.84 96.8 view view
rs573514   rs573514 chr8:26743191 GOOD 0.45 Intronic T/C   0.29 82.8 view view
rs528257   rs528257 chr8:26743206 MONO   Intronic A/T   0.92 81.4 view view
G2286a3   rs2229125 chr8:26743798 GOOD 0.02 Missense T/G   0.96 100 view view
G2286a1     chr8:26743937 GOOD 0.01 Missense T/G   1 100 view view
rs574584   rs574584 chr8:26745594 GOOD 0.03 5' of transcribed region A/G   0.99 88.2 view view
rs762701   rs762701 chr8:26745800 MONO   5' of transcribed region C/T   0.92 86.5 view view
rs737045   rs737045 chr8:26745987 GOOD 0.03 5' of transcribed region A/G   0.99 95.9 view view
rs3808585   rs3808585 chr8:26746236 GOOD 0.30 5' of transcribed region A/G   0.97 87.1 view view
hCV11858584     chr8:26746882 GOOD 0.31 5' of transcribed region a/g 1 0.011 96.8 view view
rs7814732   rs7814732 chr8:26747293 MONO   5' of transcribed region C/T   1 100 view view
rs7009786   rs7009786 chr8:26747819 GOOD 0.14 5' of transcribed region A/G   0.914 100 view view
rs6996046   rs6996046 chr8:26748143 MONO   5' of transcribed region A/G   1 100 view view
rs2644627   rs2644627 chr8:26748551 GOOD 0.45 5' of transcribed region G/C   0.98 94.6 view view
rs922733   rs922733 chr8:26749280 GOOD 0.23 5' of transcribed region C/T 1 0.75 88.2 view view
rs4639517   rs4639517 chr8:26749945 GOOD 0.35 5' of transcribed region G/A   0.99 98.9 view view
rs559920   rs559920 chr8:26750066 GOOD 0.26 5' of transcribed region C/G   0.22 91.4 view view
rs472585   rs472585 chr8:26750147 GOOD 0.06 5' of transcribed region A/C 1 0.96 96.8 view view
rs536220   rs536220 chr8:26750347 GOOD 0.41 5' of transcribed region C/T   0.99 100 view view
rs7841405   rs7841405 chr8:26751330 MONO   5' of transcribed region A/C   1 100 view view
rs483392   rs483392 chr8:26751651 GOOD 0.45 5' of transcribed region C/T   0.98 100 view view
rs984226   rs984226 chr8:26753352 GOOD 0.02 5' of transcribed region G/A   1 98.9 view view
rs498246   rs498246 chr8:26754021 GOOD 0.07 5' of transcribed region C/T   0.99 100 view view
rs922738   rs922738 chr8:26754609 MONO   5' of transcribed region A/C   0.93 75.3 view view
rs489223   rs489223 chr8:26758899 GOOD 0.15 5' of transcribed region A/G 1 0.45 97.8 view view

Download a spreadsheet containing this information for all CardioGenomics SNPs that have undergone genotyping:

Page last modified September 14, 2005.

Project 5 > SNP Discovery and Genotyping > Candidate Gene List > ADRA1A Main Page > SNPs Genotyped in ADRA1A