Project 5SNP Discovery and GenotypingCandidate Gene ListADM Main Page > SNPs Genotyped in ADM


SNPs Genotyped for LD Determination in ADM

Reference cDNA sequence (GenBank):   NM_001124

Download raw genotyping data for ADM

SNP ID alias dbSNP UCSC Coordinates Results Minor Allele Frequency in Caucasians Polymorphism Type Alternate Nucleotides Mendel Errors Hwpval % geno Primer Information Flanking Sequence
hCV475367     chr11:10282596 GOOD 0.27 5' of transcribed region G/T   0.64 89.2 view view
rs7107727   rs7107727 chr11:10286328 GOOD 0.09 5' of transcribed region C/T   1 94.5 view view
rs4641466   rs4641466 chr11:10287335 GOOD 0.36 5' of transcribed region C/G   0.79 98.9 view view
rs4399321   rs4399321 chr11:10287787 GOOD 0.33 5' of transcribed region A/G   0.98 96.8 view view
rs7949974   rs7949974 chr11:10288168 MONO   5' of transcribed region A/C   1 97.8 view view
hCV215754   rs7924631 chr11:10288370 GOOD 0.48 5' of transcribed region A/G   0.37 92.5 view view
rs7927874   rs7927874 chr11:10288500 GOOD 0.44 5' of transcribed region C/T   0.034 87.9 view view
rs3814700   rs3814700 chr11:10288967 GOOD 0.09 5' of transcribed region C/T   0.93 100 view view
rs5000   rs5000 chr11:10290000 MONO   5' of transcribed region G/T   0.91 89.6 view view
rs5003   rs5003 chr11:10291046 MONO   5' UTR C/T   0.91 94.6 view view
rs5004   rs5004 chr11:10291607 MONO   Silent A/C   0.91 97.8 view view
rs5005   rs5005 chr11:10291856 MONO   Missense C/G   0.91 96.8 view view
rs5006   rs5006 chr11:10292546 MONO   3' UTR G/C   0.91 96.8 view view
rs1126517   rs1126517 chr11:10292607 MONO   3' UTR A/G   0.91 96.8 view view
rs5007   rs5007 chr11:10292694 MONO   3' UTR T/G   0.92 87.1 view view
rs1801588   rs1801588 chr11:10293076 MONO   3' UTR G/A   0.91 95.7 view view
rs1126716   rs1126716 chr11:10293177 MONO   3' UTR A/C   0.91 96.8 view view
rs5008   rs5008 chr11:10293191 MONO   3' UTR T/C   0.91 98.9 view view
rs5009   rs5009 chr11:10293456 MONO   3' of transcribed region A/G   0.91 95.7 view view
rs5010   rs5010 chr11:10293553 GOOD 0.08 3' of transcribed region C/T   0.99 75.3 view view
rs4403799   rs4403799 chr11:10294764 MONO   3' of transcribed region A/G   1 97.8 view view
hCV215752   rs7944706 chr11:10295620 GOOD 0.48 3' of transcribed region A/G   0.37 94.6 view view
hCV26176007   rs4076050 chr11:10295879 GOOD 0.08 3' of transcribed region C/T   0.95 91.4 view view
hCV26176006   rs4444073 chr11:10295973 GOOD 0.48 3' of transcribed region A/C   0.33 97.8 view view
rs2060658   rs2060658 chr11:10298158 GOOD 0.46 3' of transcribed region C/T 1 0.7 84.9 view view
rs1450268   rs1450268 chr11:10299910 MONO   3' of transcribed region G/T   0.92 86.5 view view
rs1450265   rs1450265 chr11:10300009 MONO   3' of transcribed region G/T   0.91 90.6 view view

Download a spreadsheet containing this information for all CardioGenomics SNPs that have undergone genotyping:


Page last modified September 14, 2005.

Project 5SNP Discovery and GenotypingCandidate Gene ListADM Main Page > SNPs Genotyped in ADM