Project 5 > SNP Discovery and Genotyping > Candidate Gene List > ACTC Main Page > SNPs Genotyped in ACTC
Reference cDNA sequence (GenBank): NM_005159
Download raw genotyping data for ACTC
| SNP ID | alias | dbSNP | UCSC Coordinates | Results | Minor Allele Frequency in Caucasians | Polymorphism Type | Alternate Nucleotides | Mendel Errors | Hwpval | % geno | Primer Information | Flanking Sequence |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs518506 | rs518506 | chr15:32792587 | GOOD | 0.20 | 3' of transcribed region | C/T | 0.93 | 100 | view | view | ||
| rs661392 | rs661392 | chr15:32793106 | GOOD | 0.37 | 3' of transcribed region | A/G | 0.92 | 97.8 | view | view | ||
| rs2217942 | rs2217942 | chr15:32793338 | GOOD | 0.08 | 3' of transcribed region | C/T | 0.87 | 96.8 | view | view | ||
| rs646601 | rs646601 | chr15:32794063 | MONO | 3' of transcribed region | A/G | 0.98 | 98.9 | view | view | |||
| rs632327 | rs632327 | chr15:32794971 | GOOD | 0.12 | 3' of transcribed region | A/T | 0.7 | 90.3 | view | view | ||
| rs503639 | rs503639 | chr15:32796047 | MONO | 3' of transcribed region | A/T | 1 | 100 | view | view | |||
| rs604689 | rs604689 | chr15:32796579 | GOOD | 0.47 | 3' of transcribed region | C/T | 0.7 | 96.8 | view | view | ||
| rs533021 | rs533021 | chr15:32796987 | GOOD | 0.33 | 3' of transcribed region | C/T | 0.93 | 96.8 | view | view | ||
| rs589759 | rs589759 | chr15:32797630 | GOOD | 0.26 | 3' of transcribed region | C/T | 0.85 | 100 | view | view | ||
| rs1370155 | rs1370155 | chr15:32798197 | GOOD | 0.08 | 3' of transcribed region | C/T | 0.99 | 96.8 | view | view | ||
| rs1370154 | rs1370154 | chr15:32798281 | GOOD | 0.22 | 3' of transcribed region | A/G | 0.602 | 93.5 | view | view | ||
| rs2307494 | rs2307494 | chr15:32799307 | MONO | Intronic | C/T | 1 | 93.5 | view | view | |||
| rs2307493 | rs2307493 | chr15:32799434 | MONO | Silent | C/T | 0.98 | 96.8 | view | view | |||
| rs3729757 | rs3729757 | chr15:32800162 | MONO | Intronic | A/G | 1 | 100 | view | view | |||
| rs3729756 | rs3729756 | chr15:32800178 | MONO | Intronic | A/G | 1 | 98.9 | view | view | |||
| rs3729755 | rs3729755 | chr15:32800271 | GOOD | 0.24 | Intronic | C/G | 1 | 98.9 | view | view | ||
| rs2070664 | rs2070664 | chr15:32801257 | GOOD | 0.46 | Intronic | A/G | 0.54 | 100 | view | view | ||
| rs7165006 | rs7165006 | chr15:32801953 | GOOD | 0.07 | Intronic | C/G | 1 | 98.9 | view | view | ||
| rs7166290 | rs7166290 | chr15:32802310 | MONO | Intronic | C/T | 1 | 96.8 | view | view | |||
| rs7166484 | rs7166484 | chr15:32802422 | GOOD | 0.46 | Intronic | C/T | 0.902 | 97.8 | view | view | ||
| rs11629614 | rs11629614 | chr15:32802586 | GOOD | 0.01 | Intronic | A/G | 1 | 100 | view | view | ||
| rs7178464 | rs7178464 | chr15:32804386 | MONO | 5' of transcribed region | G/T | 1 | 96.8 | view | view | |||
| rs3759834 | rs3759834 | chr15:32804761 | MONO | 5' of transcribed region | C/T | 1 | 95.7 | view | view | |||
| rs525720 | rs525720 | chr15:32805190 | GOOD | 0.14 | 5' of transcribed region | A/G | 0.87 | 93.5 | view | view | ||
| rs670957 | rs670957 | chr15:32805488 | GOOD | 0.37 | 5' of transcribed region | C/T | 0.943 | 98.9 | view | view | ||
| rs533115 | rs533115 | chr15:32805981 | MONO | 5' of transcribed region | A/G | 0.98 | 97.8 | view | view | |||
| rs533225 | rs533225 | chr15:32806018 | MONO | 5' of transcribed region | A/T | 1 | 100 | view | view | |||
| rs893132 | rs893132 | chr15:32806116 | GOOD | 0.41 | 5' of transcribed region | C/T | 0.22 | 98.9 | view | view | ||
| rs655961 | rs655961 | chr15:32806555 | MONO | 5' of transcribed region | A/G | 1 | 98.9 | view | view | |||
| rs893131 | rs893131 | chr15:32806968 | GOOD | 0.23 | 5' of transcribed region | A/G | 0.8 | 92.5 | view | view | ||
| rs641563 | rs641563 | chr15:32807441 | GOOD | 0.44 | 5' of transcribed region | G/T | 0.546 | 94.6 | view | view | ||
| rs893130 | rs893130 | chr15:32807509 | GOOD | 0.29 | 5' of transcribed region | A/T | 0.527 | 100 | view | view | ||
| rs640249 | rs640249 | chr15:32807742 | GOOD | 0.46 | 5' of transcribed region | A/C | 0.73 | 98.9 | view | view | ||
| rs639735 | rs639735 | chr15:32807900 | GOOD | 0.34 | 5' of transcribed region | A/G | 1 | 100 | view | view | ||
| rs7168956 | rs7168956 | chr15:32808434 | GOOD | 0.03 | 5' of transcribed region | C/T | 1 | 94.6 | view | view | ||
| rs1402861 | rs1402861 | chr15:32809099 | MONO | 5' of transcribed region | G/T | 0.99 | 90.3 | view | view | |||
| rs11634368 | rs11634368 | chr15:32809120 | GOOD | 0.05 | 5' of transcribed region | C/G | 0.207 | 100 | view | view | ||
| rs4594215 | rs4594215 | chr15:32809145 | GOOD | 0.43 | 5' of transcribed region | C/G | 1 | 96.8 | view | view | ||
| rs1402862 | rs1402862 | chr15:32809163 | MONO | 5' of transcribed region | A/C | 0.98 | 100 | view | view | |||
| rs479623 | rs479623 | chr15:32809288 | GOOD | 0.41 | 5' of transcribed region | C/T | 0.61 | 100 | view | view | ||
| rs893129 | rs893129 | chr15:32809510 | GOOD | 0.18 | 5' of transcribed region | C/T | 0.89 | 98.9 | view | view | ||
| rs608929 | rs608929 | chr15:32810178 | MONO | 5' of transcribed region | A/G | 1 | 89.2 | view | view |
Download a spreadsheet containing this information for all CardioGenomics SNPs that have undergone genotyping:
Page last modified September 14, 2005.
Project 5 > SNP Discovery and Genotyping > Candidate Gene List > ACTC Main Page > SNPs Genotyped in ACTC